2023
Renz C, Asimaki E, Meister C, Albanèse V, Petriukov K, Krapoth NC, Wegmann S, Wollscheid H-P, Wong RP, Fulzele A, Chen J-X, Léon S and Ulrich HD (2023) Ubiquiton—An inducible, linkage-specific polyubiquitylation tool. Mol Cell, doi: 10.1016/j.molcel.2023.11.016 Link
Suryo Rahmanto A, Blum CJ, Scalera C, Heidelberger JB, Mesitov M, Horn-Ghetko D, Gräf JF, Mikicic I, Hobrecht R, Orekhova A, Ostermaier M, Ebersberger S, Möckel MM, Krapoth N, Da Silva Fernandes N, Mizi A, Zhu Y, Chen J-X, Choudhary C, Papantonis A, Ulrich HD, Schulman BA, König J and Beli P (2023) K6-linked ubiquitylation marks formaldehyde-induced RNA-protein crosslinks for resolution. Mol Cell, doi: 10.1016/j.molcel.2023.10.011 Link
Wollscheid H-P and Ulrich HD (2023) Chromatin meets the cytoskeleton: the importance of nuclear actin dynamics and associated motors for genome stability. DNA Repair (Amst), doi: 10.1016/j.dnarep.2023.103571 Link
Yakoub G, Choi Y-S, Wong RP, Strauch T, Ann KJ, Cohen RE and Ulrich HD (2023) Avidity-based biosensors for ubiquitylated PCNA reveal choreography of DNA damage bypass.Sci Adv, doi:10.1126/sciadv.adf3041 Link
Shi J, Hauschulte K, Mikicic I, Maharjan S, Arz V, Heidelberger JB, Schaefer J V, Dreier B, Plückthun A, Beli P, Ulrich HD and Wollscheid H-P (2022) Nuclear myosin VI maintains replication fork stability. Nat Commun, doi: 10.1038/s41467-023-39517-y Link
2022
Oo JA, Pálfi K, Warwick T, Wittig I, Prieto-Garcia C, Matkovic V, Tomašković I, Boos F, Izquierdo Ponce J, Teichmann T, Petriukov K, Haydar S, Maegdefessel L, Wu Z, Pham MD, Krishnan J, Baker AH, Günther S, Ulrich HD, Dikic I, Leisegang MS and Brandes RP (2022) Long non-coding RNA PCAT19 safeguards DNA in quiescent endothelial cells by preventing uncontrolled phosphorylation of RPA2. Cell Rep, doi: 10.1016/j.celrep.2022.111670 Link
Oravcová M, Nie M, Zilio N, Maeda S, Jami-Alahmadi Y, Lazzerini-Denchi E, Wohlschlegel JA, Ulrich HD, Otomo T and Boddy MN (2022) The Nse5/6-like SIMC1-SLF2 Complex Localizes SMC5/6 to Viral Replication Centers. Elife, doi: 10.7554/eLife.79676 Link
Wegmann S, Meister C, Renz C, Yakoub G, Wollscheid H-P, Takahashi DT, Mikicic I, Beli P and Ulrich HD (2022) Linkage reprogramming by tailor-made E3s reveals polyubiquitin chain requirements in DNA-damage bypass. Mol Cell, doi: 10.1016/j.molcel.2022.02.016 Link
2021
Asimaki E, Petriukov K, Renz C, Meister C and Ulrich HD (2021) Fast friends – Ubiquitin-like modifiers as engineered fusion partners. Semin Cell Dev Biol, doi: 10.1016/j.semcdb.2021.11.013 Link
Cabello-Lobato MJ, González-Garrido C, Cano-Linares MI, Wong RP, Yáñez-Vílchez A, Morillo-Huesca M, Roldán-Romero JM, Vicioso M, González-Prieto R, Ulrich HD and Prado F (2021) Physical interactions between MCM and Rad51 facilitate replication fork lesion bypass and ssDNA gap filling by non-recombinogenic functions. Cell Rep, doi: 10.1016/j.celrep.2021.109440 Link
Wong RP, Petriukov K and Ulrich HD (2021) Daughter-strand gaps in DNA replication – substrates of lesion processing and initiators of distress signalling. DNA Repair (Amst), doi: 10.1016/j.dnarep.2021.103163 Link
Dietz S, Almeida MV, Nischwitz E, Schreier J, Viceconte N, Fradera-Sola A, Renz C, Ceron-Noriega A, Ulrich HD, Kappei D, Ketting RF and Butter F (2021) The double-stranded DNA-binding proteins TEBP-1 and TEBP-2 form a telomeric complex with POT-1. Nat Commun, doi: 10.1038/s41467-021-22861-2 Link
González-Prieto R, Eifler-Olivi K, Claessens LA, Willemstein E, Xiao Z, Talavera Ormeno CMP, Ovaa H, Ulrich HD and Vertegaal ACO (2021) Global non-covalent SUMO interaction networks reveal SUMO-dependent stabilization of the non-homologous end joining complex. Cell Rep, doi: 10.1016/j.celrep.2021.108691 Link
2020
Cano‐Linares MI, Yáñez‐Vilches A, García‐Rodríguez N, Barrientos‐Moreno M, González‐Prieto R, San‐Segundo P, Ulrich HD and Prado F (2020) Non‐recombinogenic roles for Rad52 in translesion synthesis during DNA damage tolerance. EMBO Rep, doi: 10.15252/embr.202050410 Link
Zilio N and Ulrich HD (2020) Exploring the SSBreakome: genome‐wide mapping of DNA single‐strand breaks by next‐generation sequencing. FEBS J, doi: 10.1111/febs.15568 Link
Sriramachandran AM, Petrosino G, Méndez-Lago M, Schäfer AJ, Batista-Nascimento LS, Zilio N and Ulrich HD (2020) Genome-wide Nucleotide-Resolution Mapping of DNA Replication Patterns, Single-Strand Breaks, and Lesions by GLOE-Seq. Mol Cell, doi: 10.1016/j.molcel.2020.03.027 Link
Renz C, Albanèse V, Tröster V, Albert TK, Santt O, Jacobs SC, Khmelinskii A, Léon S and Ulrich HD (2020) Ubc13-Mms2 cooperates with a family of RING E3s in membrane protein sorting.J Cell Sci, doi: 10.1242/jcs.244566 Link
Takahashi TS, Wollscheid H-P, Lowther J and Ulrich HD (2020) Effects of chain length and geometry on the activation of DNA damage bypass by polyubiquitylated PCNA. Nucleic Acids Res, doi: 10.1093/nar/gkaa053 Link
2019
Lockhart A, Pires VB, Bento F, Kellner V, Luke-Glaser S, Yakoub G, Ulrich HD and Luke B (2019) RNase H1 and H2 Are Differentially Regulated to Process RNA-DNA Hybrids. Cell Rep, doi: 10.1016/j.celrep.2019.10.108 Link
Wong RP, García-Rodríguez N, Zilio N, Hanulová M and Ulrich HD (2019) Processing of DNA Polymerase-Blocking Lesions during Genome Replication Is Spatially and Temporally Segregated from Replication Forks. Mol Cell, doi: 10.1016/j.molcel.2019.09.015 Link
Sriramachandran AM, Meyer-Teschendorf K, Pabst S, Ulrich HD, Gehring NH, Hofmann K, Praefcke GJK and Dohmen RJ (2019) Arkadia/RNF111 is a SUMO-targeted ubiquitin ligase with preference for substrates marked with SUMO1-capped SUMO2/3 chain. Nat Commun, doi: 10.1038/s41467-019-11549-3 Link
Cordeiro Rodrigues RJ, de Jesus Domingues AM, Hellmann S, Dietz S, de Albuquerque BFM, Renz C, Ulrich HD, Sarkies P, Butter F and Ketting RF (2019) PETISCO is a novel protein complex required for 21U RNA biogenesis and embryonic viability.Genes Dev, doi: 10.1101/gad.322446.118 Link
García-Rodríguez N and Ulrich HD (2019) A dual system to manipulate protein levels for DNA replication- and cell cycle-related studies.Methods in Enzymology, doi: 10.1016/bs.mie.2018.12.038 Link